CDS
| Accession Number | TCMCG051C17760 |
| gbkey | CDS |
| Protein Id | XP_024457345.1 |
| Location | complement(join(20399715..20399838,20400955..20401250,20401337..20401518,20401632..20401899,20402035..20402095,20402578..20402633,20403330..20403389,20404299..20404369,20404475..20404603,20405980..20406092,20406222..20406355,20406796..20406861,20406945..20407004,20407557..20407661)) |
| Gene | LOC7469197 |
| GeneID | 7469197 |
| Organism | Populus trichocarpa |
Protein
| Length | 574aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024601577.1 |
| Definition | small RNA degrading nuclease 5 isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | Small RNA degrading nuclease |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14570
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGGAGATTCCGCTGAGCGTAAAAGTGAGGTTAAGGAGGAAAAAACGAGCGATTGCAGCAGCAGCAGCAAGGGGAATAAATTTTACGATATCTATGGACCAGATGCCAGAGCGGAAGTTGTTTACAAGACGCCGCCAGAAACAAGCTCAACTTTGAATCTGCAAGACGTTCAAGGACTTGTAACTTGGGTGCTTTCTGAAGGATTCATGCCATCTTGGGTGTTTATCAAGAACAAACCTCTGATTCCAAAAGTGGTTATGCTTTATGTACCTGGCCTGGATGCAGCTTTATACATTTCACAGTCTAAGTTGCTTGCTGGCTTTAAAGAGTGCTGTGGGAACCCAATGCCACTTTTATCTCTTAGCTGTGTTTCCGATGGAATGCAGACAGTAGATGCACTTCTAACATGCAAGATGAAAAGAAAGAGAAATGAAGTAGATTCAGTTTCAAGGAAATCTGTCCTGACTTCTGAACAAGAAAGAAACAATTCTAGCATGGGAAATATATCATCGGCAGGACTCATGAAAGATTTACCTTTCCCACTATCATATTATACACTTACAGCTAAAGAATTGGAAGACAATGGATATTGCATCAATCAACCAGGTTTTGTTTCTACGGTTTCTGCACCTTCAGGTTCTGGTCCCTATGATATACTGGCACTTGACTGTGAAATGTGTATCACAAACGAGGGTTTTGAGCTAACAAGAGTAACCCTGGTGGATATTGAAGGACAGGTGGTGTTGGATAAATTGGTTAAACCCTCAAATGATATTGTTGATTACAATACCAGGTTTAGTGGGATTACATATGAGATGTTGAATGGGGTAACCACAAGTCTTAAAGACATTCAGGAAGACTTTCTAAAGCTGGTTTACAAAGAGACCATCCTGGTTGGGCATTCCCTGGAGAATGATTTGTTAGCTCTAAAGATCTCTCATGAAGTGGTGATTGATACTGCACTATTGTACAAACATCCCCGGGGTGGAAATTATAAAACTGCTCTTCGAGTTCTTTCAAAGAGATTTCTTTCTCAGGAGATACAGCAATCAGGGGCTGGGCATGACAGCATTGAAGATGCAAGAGCTACTATGGAACTGGCACTATTAAAGATAAGAAATGGACCTGATTTTGGGTCTCCCCCATCATTTGTGCGGAGAAAGCTCCTTACAGTTTTGAGTGAGTGTGGTAAAACCTCCTCATTCATTGATGATATTTCCATAGTAAAGCGGTACACATCTGGTTCATCCCATTCATTTCCTGTGTCTTCCGATGAGGAAGCACTTTTGAAAGCTAGAAAGGAGGTTAAGAATGATGGAGTACACTTTGTCTGGACCCAATTTTCAGAGTTGAATTCCTATTTCAAGAAACAAGCAGAGGATGAAGGGAAGTTAAATGGAAAACTTGCAGAGATGATATCATTACTTACATGTGAAAAGAAGTCAACCAACACAAAAGGCATGAAATGCAGTATGACACCCCAACTAAAGGAAATTCTTACTCAGATGGATGCTAGGGTTCGTTGCCTCTACTCCACGCTACCGACTAATACCATGCTCATAATTTGCACTGGACATGGAGATACAGCAATAGTGAATAGGGTAAGGAAAATGCTCGCAGAGCAGAAAGAAACTGCAATATCTCGTGAGAAGATTGTCAAGGTCTTGGAAGAGCTCCAGGCTCAAGCTGAAGTAGCGTTATGTTTTGTGGGTGTGAAGAACTGA |
| Protein: MGDSAERKSEVKEEKTSDCSSSSKGNKFYDIYGPDARAEVVYKTPPETSSTLNLQDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALYISQSKLLAGFKECCGNPMPLLSLSCVSDGMQTVDALLTCKMKRKRNEVDSVSRKSVLTSEQERNNSSMGNISSAGLMKDLPFPLSYYTLTAKELEDNGYCINQPGFVSTVSAPSGSGPYDILALDCEMCITNEGFELTRVTLVDIEGQVVLDKLVKPSNDIVDYNTRFSGITYEMLNGVTTSLKDIQEDFLKLVYKETILVGHSLENDLLALKISHEVVIDTALLYKHPRGGNYKTALRVLSKRFLSQEIQQSGAGHDSIEDARATMELALLKIRNGPDFGSPPSFVRRKLLTVLSECGKTSSFIDDISIVKRYTSGSSHSFPVSSDEEALLKARKEVKNDGVHFVWTQFSELNSYFKKQAEDEGKLNGKLAEMISLLTCEKKSTNTKGMKCSMTPQLKEILTQMDARVRCLYSTLPTNTMLIICTGHGDTAIVNRVRKMLAEQKETAISREKIVKVLEELQAQAEVALCFVGVKN |